Publications

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acoustics
P. Snoejis-Leijonmalm, Gjøsæter, H., Ingvaldsen, R. B., Knutsen, T., Korneliussen, R., Ona, E., Skjoldal, H. Rune, Stranne, C., Mayer, L. A., Jakobsson, M., and Gårdfeldt, K., “A Deep Scattering Layer Under the North Pole Pack Ice”, Progress in Oceanography, vol. 194. 2021.
adaptive monitoring
R. E. Grizzle, Ward, L. G., Fredriksson, D. W., Irish, J. D., Langan, R., Heinig, C., Greene, J. K., Abeels, H. A., Peter, C. R., and Eberhardt, A. L., “Long-term Seafloor Monitoring at an Open Ocean Aquaculture Site in the Western Gulf of Maine, USA: Development of an Adaptive Protocol”, Marine Pollution Bulleten, vol. 88. pp. 129-137, 2014.
airborne bathymetric lidar
G. Imahori, Ferguson, J., Wozumi, T., Scharff, D., Pe'eri, S., Parrish, C. E., White, S. A., Jeong, I., Sellars, J., and Aslaksen, M., “A procedure for developing an acceptance test for airborne bathymetric lidar data application to NOAA charts in shallow waters”, National Oceanic and Atmospheric Administration (NOAA), National Ocean Survey (NOS), Silver Spring, MD, 2013.
airborne topographic-bathymetry lidar
J. Wozencraft, Aslaksen, M., Imahori, G., Pe'eri, S., and Witmer, J., “Using JALBTCX - USACE Airborne Topographic-Bathymetric Lidar to Update Coastal Bathymetry on NOAA Nautical Charts”, 2016 Canadian Hydrographic Conference. Halifax, Nova Scotia, Canada, 2016.
Arctogadus
P. Snoejis-Leijonmalm, Gjøsæter, H., Ingvaldsen, R. B., Knutsen, T., Korneliussen, R., Ona, E., Skjoldal, H. Rune, Stranne, C., Mayer, L. A., Jakobsson, M., and Gårdfeldt, K., “A Deep Scattering Layer Under the North Pole Pack Ice”, Progress in Oceanography, vol. 194. 2021.
Atlantic water layer
P. Snoejis-Leijonmalm, Gjøsæter, H., Ingvaldsen, R. B., Knutsen, T., Korneliussen, R., Ona, E., Skjoldal, H. Rune, Stranne, C., Mayer, L. A., Jakobsson, M., and Gårdfeldt, K., “A Deep Scattering Layer Under the North Pole Pack Ice”, Progress in Oceanography, vol. 194. 2021.
benthic habitat
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
benthos
R. E. Grizzle, Ward, L. G., Fredriksson, D. W., Irish, J. D., Langan, R., Heinig, C., Greene, J. K., Abeels, H. A., Peter, C. R., and Eberhardt, A. L., “Long-term Seafloor Monitoring at an Open Ocean Aquaculture Site in the Western Gulf of Maine, USA: Development of an Adaptive Protocol”, Marine Pollution Bulleten, vol. 88. pp. 129-137, 2014.
Boreogadus
P. Snoejis-Leijonmalm, Gjøsæter, H., Ingvaldsen, R. B., Knutsen, T., Korneliussen, R., Ona, E., Skjoldal, H. Rune, Stranne, C., Mayer, L. A., Jakobsson, M., and Gårdfeldt, K., “A Deep Scattering Layer Under the North Pole Pack Ice”, Progress in Oceanography, vol. 194. 2021.
Boundary Layer Flow
T. C. Lippmann, “Subtidal Flow Structure in Tidally Modulated Inlets”, Coastal Dynamics 2013, vol. 1. ASCE, Plymouth, England, United Kingdom, 2013.PDF icon 130_lippmann_thomas.pdf (7.65 MB)
bradyseism
M. Grassi, Carmisciano, C., Cocchi, L., Dialti, L., Filippone, M., Guideri, M., Ivaldi, R., Masetti, G., Muccini, F., Pratellesi, M., Ricci, E., and Stefanelli, P., “Caratterizzazione dell’ambiente marino dei Campi Flegrei. Risultati preliminari della campagna oceanografica RICAMAR 2013”, 17a Conferenza Nazionale ASITA. Atti 17a Conferenza Nazionale ASITA, Riva del Garda, Italy, 2013.PDF icon Masetti_2013_RICAMAR_ASITA13.pdf (895.86 KB)
caldera
M. Grassi, Carmisciano, C., Cocchi, L., Dialti, L., Filippone, M., Guideri, M., Ivaldi, R., Masetti, G., Muccini, F., Pratellesi, M., Ricci, E., and Stefanelli, P., “Caratterizzazione dell’ambiente marino dei Campi Flegrei. Risultati preliminari della campagna oceanografica RICAMAR 2013”, 17a Conferenza Nazionale ASITA. Atti 17a Conferenza Nazionale ASITA, Riva del Garda, Italy, 2013.PDF icon Masetti_2013_RICAMAR_ASITA13.pdf (895.86 KB)
Central Arctic Ocean (CAO)
P. Snoejis-Leijonmalm, Gjøsæter, H., Ingvaldsen, R. B., Knutsen, T., Korneliussen, R., Ona, E., Skjoldal, H. Rune, Stranne, C., Mayer, L. A., Jakobsson, M., and Gårdfeldt, K., “A Deep Scattering Layer Under the North Pole Pack Ice”, Progress in Oceanography, vol. 194. 2021.
coastal bathymetry
J. Wozencraft, Aslaksen, M., Imahori, G., Pe'eri, S., and Witmer, J., “Using JALBTCX - USACE Airborne Topographic-Bathymetric Lidar to Update Coastal Bathymetry on NOAA Nautical Charts”, 2016 Canadian Hydrographic Conference. Halifax, Nova Scotia, Canada, 2016.
Community Structure; Benthic Habitat; Environmental Variability; North Pacific; Subarctic
J. L. Pirtle, Ibarra, S. N., and Eckert, G. L., “Nearshore subtidal community structure compared between inner coast and outer coast sites in Southeast Alaska”, Polar Biology, vol. 35. pp. 1889-1910, 2012.
Data Processing
J. Beaudoin, Calder, B. R., Hiebert, J., and Imahori, G., “Estimation of Sounding Uncertainty from Measurements of Water Mass Variability”, International Hydrographic Review. Geomatics Information & Trading Center - GITC, Lemmers, Amsterdam, The Netherlands, pp. 20-38, 2009.
Data Visualization
P. Irani, Ware, C., and Tingley, M., “Using Perceptual Syntax to Enhance Semantic Content in Diagrams”, IEEE Computer Graphics and Application, vol. 21. IEEE, Washington DC, Washington DC, USA, pp. 76-85, 2001.PDF icon Irani_01_IEEE_CGA_Using_Perceptual_Syntax.pdf (241.07 KB)
R. Kosara, Healey, C. G., Interrante, V., Laidlaw, D. H., and Ware, C., “Thoughts on User Studies: Why, How and When”, IEEE Computer Graphics and Application. IEEE, Washington DC, Washington DC, USA, pp. 0-0, 1993.
eastern pacific
N. A. Raineault, Mayer, L. A., Ballard, R., and Irish, O., “Mapping the Eastern Pacific Ocean”, Oceanography, vol. 29, No.1, Supplement. The Oceanography Society, pp. 38-9, 2016.PDF icon mayer-oceanography-v29-no1-eastern-pacific.pdf (484.31 KB)
Echosounder
P. Snoejis-Leijonmalm, Gjøsæter, H., Ingvaldsen, R. B., Knutsen, T., Korneliussen, R., Ona, E., Skjoldal, H. Rune, Stranne, C., Mayer, L. A., Jakobsson, M., and Gårdfeldt, K., “A Deep Scattering Layer Under the North Pole Pack Ice”, Progress in Oceanography, vol. 194. 2021.
environmental impacts
R. E. Grizzle, Ward, L. G., Fredriksson, D. W., Irish, J. D., Langan, R., Heinig, C., Greene, J. K., Abeels, H. A., Peter, C. R., and Eberhardt, A. L., “Long-term Seafloor Monitoring at an Open Ocean Aquaculture Site in the Western Gulf of Maine, USA: Development of an Adaptive Protocol”, Marine Pollution Bulleten, vol. 88. pp. 129-137, 2014.
Finfish cages
R. E. Grizzle, Ward, L. G., Fredriksson, D. W., Irish, J. D., Langan, R., Heinig, C., Greene, J. K., Abeels, H. A., Peter, C. R., and Eberhardt, A. L., “Long-term Seafloor Monitoring at an Open Ocean Aquaculture Site in the Western Gulf of Maine, USA: Development of an Adaptive Protocol”, Marine Pollution Bulleten, vol. 88. pp. 129-137, 2014.
Foundation species
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
GEBCO
D. Monahan, Schwehr, K., Wigley, R., Uddin, M. J., Tinmouth, N., Jinadasa, P., Ito, K., and Goncalves, D., “GEBCO Visual Library, Proof of Concept”, International Bathymetric Science Day. Tokyo, Tokyo, Japan, pp. 1-1, 2008.Image icon monahan_08_ISBD2.png (476.56 KB)
Habitat architecture
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
hydrography
G. Imahori, Ferguson, J., Wozumi, T., Scharff, D., Pe'eri, S., Parrish, C. E., White, S. A., Jeong, I., Sellars, J., and Aslaksen, M., “A procedure for developing an acceptance test for airborne bathymetric lidar data application to NOAA charts in shallow waters”, National Oceanic and Atmospheric Administration (NOAA), National Ocean Survey (NOS), Silver Spring, MD, 2013.
Inlet Dynamics
T. C. Lippmann, “Subtidal Flow Structure in Tidally Modulated Inlets”, Coastal Dynamics 2013, vol. 1. ASCE, Plymouth, England, United Kingdom, 2013.PDF icon 130_lippmann_thomas.pdf (7.65 MB)
inlets
T. C. Lippmann, Irish, J. D., and Hunt, J., “Observations of the Vertical Structure of Tidal Currents in Two Inlets”, Journal of Coastal Research, vol. 65, Special Issue. pp. 2029-2034, 2013.PDF icon ICS2013_lippmann_revised2.pdf (4.17 MB)
Integrated Ocean and Coastal Mapping
G. Imahori, Ferguson, J., Wozumi, T., Scharff, D., Pe'eri, S., Parrish, C. E., White, S. A., Jeong, I., Sellars, J., and Aslaksen, M., “A procedure for developing an acceptance test for airborne bathymetric lidar data application to NOAA charts in shallow waters”, National Oceanic and Atmospheric Administration (NOAA), National Ocean Survey (NOS), Silver Spring, MD, 2013.
invasive species
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
jalbtcx
J. Wozencraft, Aslaksen, M., Imahori, G., Pe'eri, S., and Witmer, J., “Using JALBTCX - USACE Airborne Topographic-Bathymetric Lidar to Update Coastal Bathymetry on NOAA Nautical Charts”, 2016 Canadian Hydrographic Conference. Halifax, Nova Scotia, Canada, 2016.
kelp
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
macroalgae
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
Macrophyte architecture
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
marine deformation
M. Grassi, Carmisciano, C., Cocchi, L., Dialti, L., Filippone, M., Guideri, M., Ivaldi, R., Masetti, G., Muccini, F., Pratellesi, M., Ricci, E., and Stefanelli, P., “Caratterizzazione dell’ambiente marino dei Campi Flegrei. Risultati preliminari della campagna oceanografica RICAMAR 2013”, 17a Conferenza Nazionale ASITA. Atti 17a Conferenza Nazionale ASITA, Riva del Garda, Italy, 2013.PDF icon Masetti_2013_RICAMAR_ASITA13.pdf (895.86 KB)
Mid-Water Mapping of Inlet Currents
T. C. Lippmann, Irish, J. D., McKenna, L., and Foster, D., “Observations of Currents in a Tidally Modulated Inlet”, TOS/ASLO/AGU Ocean Sciences. Salt Lake City, UT, 2012.
Multibeam Sonars
J. Felzenberg, Ward, L. G., Rzhanov, Y., Irish, J. D., and Mayer, L. A., “Detecting bedform migration in Portsmouth Harbor, New Hampshire, USA, on relatively short spatial and temporal scales”, American Geophysical Union (AGU). San Francisco, CA, USA, 2008.
near-shore bathymetry
G. Imahori, Ferguson, J., Wozumi, T., Scharff, D., Pe'eri, S., Parrish, C. E., White, S. A., Jeong, I., Sellars, J., and Aslaksen, M., “A procedure for developing an acceptance test for airborne bathymetric lidar data application to NOAA charts in shallow waters”, National Oceanic and Atmospheric Administration (NOAA), National Ocean Survey (NOS), Silver Spring, MD, 2013.
noaa nautical charts
J. Wozencraft, Aslaksen, M., Imahori, G., Pe'eri, S., and Witmer, J., “Using JALBTCX - USACE Airborne Topographic-Bathymetric Lidar to Update Coastal Bathymetry on NOAA Nautical Charts”, 2016 Canadian Hydrographic Conference. Halifax, Nova Scotia, Canada, 2016.
ocean mapping
N. A. Raineault, Mayer, L. A., Ballard, R., and Irish, O., “Mapping the Eastern Pacific Ocean”, Oceanography, vol. 29, No.1, Supplement. The Oceanography Society, pp. 38-9, 2016.PDF icon mayer-oceanography-v29-no1-eastern-pacific.pdf (484.31 KB)
Other
M. Jakobsson and I.B.C.A.O Board Members, “Improvements to the International Bathymetric Chart of the Arctic Ocean: Updating the database and the grid model”, EOS Transactions, American Geophysical Union, vol. 84. American Geophysical Union , Washington DC, Washington DC, USA, pp. 0-0, 2001.
P. Irani and Ware, C., “Diagramming Information Structures Using 3D Perceptual Primitives”, ACM Transactions on Computer-Human Interaction (CHI), vol. 10. Association for Computing Machinery (ACM), New York, NY, USA, pp. 1-19, 2003.
P. Traykovski, Richardson, M. D., Mayer, L. A., and Irish, J. D., “Mine Burial Experiments at the Martha's Vineyard Coastal Observatory”, IEEE Journal of Oceanic Engineering, vol. 32. IEEE, Washington DC, Washington DC, USA, pp. 150-166, 2005.
K. H. Brink, Beardsley, R. C., Limeburner, R., Irish, J. D., and Caruso, M., “Long-Term Moored Array Measurements of Currents and Hydrography over Georges Bank: 1994-1999”, Progress in Oceanography, vol. 82. Elsevier, New York, NY, USA, pp. 191-223, 2009.
T. K. Stanton, Chu, D., Jech, J. M., and Irish, J. D., “New Broadband Methods for Resonance Classification and High-resolution Imagery of Fish with Swimbladders using a Modified Commercial Broadband Echosounder”, ICES Journal of Marine Science, vol. 67. Elsevier, New York, NY, USA, pp. 365-378, 2010.
P. Irani and Ware, C., “Diagrams Based on Structured Object Perception”, Advanced Visual Interface (AVI). Palermo, Palermo, Italy, pp. 61-67, 2000.PDF icon Irani_2000_AVI_Diagrams_based_on_structural_object_perception.pdf (188.32 KB)
S. J. Dijkstra and Intelmann, S., “Mapping Benthic Habitat at Various scales in the Olympic National Marine Sanctuary, WA”, National Shellfisheries Association (NSA). New Orleans, LA, USA, pp. 0-0, 2002.
J. Beaudoin, Hiebert, J., Calder, B. R., and Imahori, G., “Uncertainty Wedge Analysis: Quantifying the Impact of Sparse Sound Speed Profiling Regimes on Sounding Uncertainty”, U.S. Hydrographic Conference (US HYDRO). Norfolk, VA, USA, 2009.
J. D. Irish, Vandemark, D., Shellito, S., Salisbury, J., Plagge, A., Hanley, K., and Emond, M., “CO2 Gas Exchange and Ocean Acidification Studies in the Coastal Gulf of Maine”, IEEE Oceans. Seattle, WA, USA, 2010.
J. V. Gardner, Mayer, L. A., Armstrong, A. A., Donaldson, P., Infantino, J., Davis, G., Smith, D., Lobecker, E., Cartwright, D., Iwachiw, J., Farr, S., Meadows, D., Dorsey, S., Marsh, G., and Owen, W., “New Views of the U.S. Atlantic Margin Mapped for UNCLOS Applications”, EOS Transactions, American Geophysical Union , vol. 86. San Francisco, CA, USA, pp. 0-2, 2005.PDF icon Gardner_05_AGU_US_Atlantic_Margin_Mapped_for_UNCLOS_applications.pdf (72.17 KB)
J. V. Gardner, Mayer, L. A., Armstrong, A. A., Donaldson, P., Infantino, J., Davis, G., Smith, D., Lobecker, E., Cartwright, D., Iwachiw, J., Farr, S., Meadows, D., Dorsey, S., Marsh, G., and Owen, W., “New Views of the U.S. Atlantic Margin Mapped for UNCLOS Applications”, EOS Transactions, American Geophysical Union , vol. 86. San Francisco, CA, USA, pp. 0-2, 2005.PDF icon Gardner_05_AGU_US_Atlantic_Margin_Mapped_for_UNCLOS_applications.pdf (72.17 KB)
S. Intelmann, Smith, K., McConnaughey, R., and Rzhanov, Y., “Adding Ecological Context to Essestial Fish Habitat Models using Groundtruthing Technologies”, National Oceanic and Atmospheric Adminiatration (NOAA), Tech Memo, NMFS-F/SPO-112, 2010.
Predator-prey dynamics
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
Siphonophore
P. Snoejis-Leijonmalm, Gjøsæter, H., Ingvaldsen, R. B., Knutsen, T., Korneliussen, R., Ona, E., Skjoldal, H. Rune, Stranne, C., Mayer, L. A., Jakobsson, M., and Gårdfeldt, K., “A Deep Scattering Layer Under the North Pole Pack Ice”, Progress in Oceanography, vol. 194. 2021.
Social sciences; Health and environmental sciences; Article 76; Commission on the limits of the continental shelf; Extended continental shelf; United Nations Convention on the Law of the Sea
O. Irish, “Analysis of CLCS Recommendations in Light of Their Relevance to the Delineation of a United States Extended Continental Shelf (ECS) in the Arctic”, University of New Hampshire, Durham, NH, 2016.PDF icon irish-onni-thesis.pdf (20.48 MB)
Spatial structure
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
Studies of Pockmark Origin and Maintenance
C. Fandel, Lippmann, T. C., and Irish, J. D., “Observation of Flow Structure Around Pockmarks in Belfast Bay, Maine”, TOS/ASLO/AGU Ocean Sciences. Salt Lake City, UT, 2012.
Subtidal Currents
T. C. Lippmann, “Subtidal Flow Structure in Tidally Modulated Inlets”, Coastal Dynamics 2013, vol. 1. ASCE, Plymouth, England, United Kingdom, 2013.PDF icon 130_lippmann_thomas.pdf (7.65 MB)
tidal currents
T. C. Lippmann, Irish, J. D., and Hunt, J., “Observations of the Vertical Structure of Tidal Currents in Two Inlets”, Journal of Coastal Research, vol. 65, Special Issue. pp. 2029-2034, 2013.PDF icon ICS2013_lippmann_revised2.pdf (4.17 MB)
topobathymetric lidar
C. E. Parrish, Eren, F., Jung, J., Imahori, G., and White, S. A., “Total Propagated Uncertainty Analysis for Topobathymetric Lidar”, 18th Annual JALBTCX Airborne Coastal Mapping and Charting Workshop. Savannah, GA, p. Savannah, GA, 2017.
topographic-bathymetric lidar
G. Imahori, Ferguson, J., Wozumi, T., Scharff, D., Pe'eri, S., Parrish, C. E., White, S. A., Jeong, I., Sellars, J., and Aslaksen, M., “A procedure for developing an acceptance test for airborne bathymetric lidar data application to NOAA charts in shallow waters”, National Oceanic and Atmospheric Administration (NOAA), National Ocean Survey (NOS), Silver Spring, MD, 2013.
uncertainty
C. E. Parrish, Eren, F., Jung, J., Imahori, G., and White, S. A., “Total Propagated Uncertainty Analysis for Topobathymetric Lidar”, 18th Annual JALBTCX Airborne Coastal Mapping and Charting Workshop. Savannah, GA, p. Savannah, GA, 2017.
usacce
J. Wozencraft, Aslaksen, M., Imahori, G., Pe'eri, S., and Witmer, J., “Using JALBTCX - USACE Airborne Topographic-Bathymetric Lidar to Update Coastal Bathymetry on NOAA Nautical Charts”, 2016 Canadian Hydrographic Conference. Halifax, Nova Scotia, Canada, 2016.
vertical structure
T. C. Lippmann, “Subtidal Flow Structure in Tidally Modulated Inlets”, Coastal Dynamics 2013, vol. 1. ASCE, Plymouth, England, United Kingdom, 2013.PDF icon 130_lippmann_thomas.pdf (7.65 MB)
T. C. Lippmann, Irish, J. D., and Hunt, J., “Observations of the Vertical Structure of Tidal Currents in Two Inlets”, Journal of Coastal Research, vol. 65, Special Issue. pp. 2029-2034, 2013.PDF icon ICS2013_lippmann_revised2.pdf (4.17 MB)