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A. M. Hartwell, Wheat, A., and Dijkstra, J. A., “Natural Warming Differentiates Communities and Increases Diversity in Deep-Sea Ridge Flank Hydrothermal Systems”, Communications Biology, vol. 7. Nature Springer, p. 379, 2024.
J. E. K. Byrnes, Brown, A., Sheridan, K., Peller, T., Lawlor, J., Beaulieu, J., Munoz, J., Hesketh, A., Pereira, A., Knight, N. S., Super, L., Bledsoe, E. K., Burant, J. B., Dijkstra, J. A., and Benes, K., “Notes from the Past Show How Local Variability Can Stymie Urchins and the Rise of the Reds in the Gulf of Maine”, Ecosphere, vol. 15. Ecological Society of America, p. e4800, 2024.
K. Van Volkom, Harris, L. G., Lambert, W. J., and Dijkstra, J. A., “The effect of surface orientation on early successional fouling communities in the southern Gulf of Maine”, Journal of Experimental Marine Biology and Ecology, vol. 569. p. 151952, 2023.
J. A. Dijkstra and Westerman, E. L., “From Kelp Forests to Cunner: The Long-Tendrilled Impact of a 50-Year Career Studying Marine Ecology in the Gulf of Maine”, Journal of Experimental Marine Biology and Ecology, vol. 569. p. 151951, 2023.
B. J. Stablow, Lovejoy, T. E., Salerno, J. L., Wood, T. C., Dijkstra, J. A., Malik, M. A., and Peters, E. C., “Spatial Distributions of Cold-Water Coral Mound Associates with Respect to Biotope Boundaries”, Benthic Ecology Meeting. p. Portsmouth, 2022.
A. Stasse, Meyer, K., Cheng, M. L. H., Bumbera, N., Van Volkom, K., Laferriere, A. M., Dijkstra, J. A., and Brown, B., “Temporal Dynamics of Eastern Oyster Larval Abundance in Great Bay Estuary, New Hampshire”, Journal of Shellfish Research, vol. 403. pp. 401-408, 2022.
J. Pierce, Butler, M. J., Rzhanov, Y., Lowell, K., and Dijkstra, J. A., “Classifying 3-D Models of Coral Reefs Using Structure-from-Motion and Multi-View Semantic Segmentation”, Frontiers in Marine Science, vol. 8:706674. 2021.
M. L. H. Cheng, Lippmann, T. C., Dijkstra, J. A., Bradt, G., Cook, S., Choi, J. - G., and Brown, B. L., “A Deposition Baseline for Microplastic Particle Distribution in an Estuary”, Marine Pollution Bulletin, vol. 170. ScienceDirect, p. https://doi.org/10.1016/j.marpolbul.2021.112653, 2021.
K. Mello, Sowers, D., Malik, M. A., Watling, L., Mayer, L. A., and Dijkstra, J. A., “Environmental and Geomorphological Effects on the Distribution of Deep-Sea Canyon and Seamount Communities in the Northwest Atlantic”, Frontiers in Marine Science, vol. 8:691668. 2021.
J. A. Dijkstra, Mello, K., Sowers, D., Malik, M. A., Watling, L., and Mayer, L. A., “Fine-scale Mapping of Deep-Sea Habitat-Forming Species Densities Reveals Taxonomic Specific Environmental Drivers”, Global Ecology and Biogeography, vol. 30. Wiley, pp. 1286-1298, 2021.
K. Van Volkom, Harris, L. G., and Dijkstra, J. A., “The Influence of Invasive Ascidian Diets on the Growth of the Sea Star Henricia Sanguinolenta”, Journal of the Marine Biological Association of the United Kingdom. Cambridge University Press, pp. 1-7, 2021.
K. Van Volkom, Harris, L. G., and Dijkstra, J. A., “Not All Prey Are Created Equal: Invasive Ascidian Diet Mediates Sea Star Wasting in Henricia Sanguinolenta”, Journal of Experimental Marine Biology and Ecology, vol. 544. p. 151610, 2021.
D. Sowers, Dijkstra, J. A., Mello, K., Masetti, G., Malik, M. A., and Mayer, L. A., “Application of the Coastal and Marine Ecological Classification Standard to Gosnold Seamount, North Atlantic Ocean”, in Seafloor Geomorphology as Benthic Habitat, 2nd nd ed., P. Harris and Baker, E., Eds. Elsevier, 2020, pp. 903-916.
A. M. Hartwell and Dijkstra, J. A., “Fine-Scale Natural Variability of Community Distribution on a Low Temperature Discharge Outcrop of a Ridge Flank Hydrothermal System”, 2020 Ocean Sciences Meeting. p. San Diego, CA, 2020.
J. Pierce, Rzhanov, Y., Lowell, K., and Dijkstra, J. A., “Reducing Annotation Times: Semantic Segmentation of Coral Reef Survey Images”, Global Oceans 2020. IEEE, U.S. Gulf Coast, Biloxi, MS, USA, pp. 1-9, 2020.
C. Kennedy, Pappal, A. L., Bastidas, C., Calrton, J. T., David, A. A., Dijkstra, J. A., Duffey, S., Gibson, J., Grady, S. P., Green-Gavrielidis, L., Harris, L. G., Hobbs, N. - V., Mauk, A., McCuller, M., Neefus, C., O'Brien, B., Osborne, K., Pederson, J., Robidoux, J., Tyler, M., and Van Volkom, K., “Report on the 2018 Rapid Assessment Survey of Introduced, Cryptogenic, and Native Marine Species at New England Marinas Massachusetts to Maine”, Commonwealth of Massachusetts, Boston, MA, 2020.
N. Wilson, Parrish, C. E., Battista, T., C. Wright, W., Costa, B., Slocum, R., Dijkstra, J. A., and Tyler, M. T., “Mapping Seafloor Reflectance and Assessing Coral Reef Morphology with EAARL-B Topographic Lidar Waveforms”, Estuaries and Coasts. Springer, 2019.
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
J. A. Dijkstra, Litterer, A., Mello, K., O'Brien, B., and Rzhanov, Y., “Temperature, Phenology, and Turf Macroalgae Drive Seascape Change: Connections to Mid-trophic Level Species”, Ecosphere, vol. 10(11). Ecological Society of America, p. e02923, 2019.
E. L. Westerman, Dijkstra, J. A., and Harris, L. G., “Climate Change, Sex, and Community State Changes in the Gulf of Maine”, Society for Integrative and Comparative Biology. p. San Francisco, CA, 2018.
B. O'Brien, Mello, K., Litterer, A., and Dijkstra, J. A., “Fish and the Decline of Kelp in the Gulf of Maine”, Benthic Ecology Meeting. p. Corpus Cristi, TX, 2018.
W. J. Lambert, Dijkstra, J. A., Clark, E., and Connolly, J., “Larval Exposure to Low Salinity Compromises Metamorphosis and Growth in the Colonial Ascidian Botrylloides Violaceus”, Invertebrate Biology, vol. 137. pp. 281-288, 2018.
J. A. Dijkstra, Mello, K., Malik, M. A., Sowers, D., and Mayer, L. A., “Mapping Community Structure of Canyons and Seamounts of the Northeastern US Atlantic Margin”, 15th Deep-Sea Biology Symposium. p. Monterey Bay, CA, 2018.
B. O'Brien, Mello, K., Litterer, A., and Dijkstra, J. A., “Seaweed Structure Shapes Trophic Interactions: A Case Study Using a Mid-Trophic Level Fish Species”, Journal of Experimental Marine Biology and Ecology, vol. 506. Elsevier, pp. 1-8, 2018.PDF icon O'Brienetal_JEMBE.pdf (868.99 KB)
P. J. Etnoyer, Malik, M. A., Sowers, D., Ruby, C., Bassett, R., Dijkstra, J. A., Pawlenko, N., Gottfried, S., Mello, K., Finkbeiner, M., and Sallis, A., “Working with Video to Improve Deep-Sea Habitat Characterization”, Oceanography, vol. 31, No.1, Supplement. The Oceanographic Society, pp. 64-67, 2018.PDF icon WorkingWithVideo_Oceanography31-1-2018_supplement.pdf (1.75 MB)
J. A. Dijkstra, Westerman, E. L., and Harris, L. G., “Elevated Seasonal Temperatures Eliminate Thermal Barriers of Reproduction of a Dominant Invasive Species: A Community State Change for Northern Communities?”, Diversity and Distributions, vol. 23. Wiley, pp. 1082-1092, 2017.PDF icon Dijkstra_et_al-2017-Diversity_and_Distributions.pdf (1000.71 KB)
J. A. Dijkstra, Harris, L. G., Mello, K., Litterer, A. S., Wells, C., and Ware, C., “Invasive Species Transform Habitat Structure and Increase Biodiversity of Associated Species”, Journal of Ecology, vol. 105. Wiley, pp. 1668-1678, 2017.PDF icon Dijkstra et al_JEC_2017.pdf (871.82 KB)
B. Costa, Walker, B., and Dijkstra, J. A., “Mapping and Quantifying Seascape Patterns”, in Seascape Ecology, S. J. Pittman, Ed. West Chester, England: John Wiley and Sons Ltd., 2017, pp. 27-49.PDF icon Chapter 2_Mapping_Quantifying_Seascapes2017-1.pdf (457.14 KB)
J. A. Dijkstra, Norton, A. R., and Dijkstra, S. J., “Three-Dimensional Assessment of Seaweed Habitats Using Remote Sensing”, Coastal and Estuarine Research Federation. p. Providence, RI, 2017.
K. Mello, Dijkstra, J. A., Malik, M. A., Sowers, D., McKenna, L., and Lobecker, E., “Coarse and Fine Scale Patterns of Community Structure of Benthic Habitats Along the US Atlantic Continental Margin”, Benthic Ecology Meeting. Portland, ME, 2016.
M. R. Carman, Colarusso, P. D., Nelson, E. P., Grunden, D. W., Wong, M. C., McKenzie, C., Matheson, K., Davidson, J., Fox, S., Neckles, H., Bayley, H., Schott, S., Dijkstra, J. A., and Stewart-Clark, S., “Distribution and Diversity of Tunicates Utilizing Eelgrass as Substrate in the Western North Atlantic: A Latitudinal Study Between N 39° and N 47°”, Management of Biological Invasions, vol. 7. pp. 51-57, 2016.PDF icon MBI_2016_Carman_etal_1.pdf (291.95 KB)
B. Costa, Battista, T., Parrish, C. E., and Dijkstra, J. A., “Evaluating the Utility of EAARL-B Lidar Waveforms for Mapping Coral Reef Habitats”, JALBTCX. Silver Spring, MD, 2016.
J. A. Dijkstra, Litterer, A. S., Mello, K., Rzhanov, Y., and Johnson, P., “A Fish Eyes View of the Impact of Non-native Seaweeds on Temperate Reef Seascapes”, Benthic Ecology Meeting. Portland, ME, 2016.
A. L. Chase, Dijkstra, J. A., and Harris, L. G., “The Influence of Substrate Material on Ascidian Larval Settlement”, Marine Pollution Bulletin, vol. 106. Elsevier, pp. 35-42, 2016.PDF icon Chase et al. 2016.pdf (1.14 MB)
J. Kinney, Bogonko, M., White, M., Nagel, E., Dijkstra, J. A., Parrish, C. E., Wilson, N., and Armstrong, A. A., “Intensity and Reflectance Mapping for Habitat Mapping and Seafloor Characterization Using the Superstorm Sandy Lidar Data”, JALBTCX. Silver Spring, MD, 2016.
J. A. Dijkstra and Simkanin, C., “Intraspecific Response of Colonial Ascidians to Variable Salinity Stress in an Era of Global Change”, Marine Ecology Progress Series, vol. 551. Inter-Research, Oldendorf/Luhe, Germany , pp. 215-225, 2016.PDF icon DijkstraSimkanin2016.pdf (745.07 KB)
J. A. Dijkstra, Litterer, A. S., Mello, K., Rzhanov, Y., Johnson, P., and O'Brien, B., “Non-Native Species Increase Habitat Heterogeneity to Influence Trophi Interactions in Temperate Reef Seascapes”, International Temperate Reef Symposium. Pisa, Italy, p. Pisa, Italy, 2016.
C. E. Parrish, Dijkstra, J. A., O'Neil-Dunne, J., McKenna, L., and Pe'eri, S., “Post-Sandy Benthic Habitat Mapping Using New Topographic-Bathymetric Lidar Technology and Object-Based Image Classification”, Journal of Coastal Research. pp. 200-208, 2016.PDF icon Parrish_et_al_JCR_2016_si76-017.pdf (4.98 MB)
C. Simkanin, Fofonoff, P. W., Larson, K., Lambert, G., Dijkstra, J. A., and Ruiz, G. M., “Spatial Extent and Temporal Dynamics of Ascidian Invasions in the Continental United States and Alaska”, Marine Biology. pp. 1-16, 2016.
R. A. MacKenzie, Chen, C. Y., and Dijkstra, J. A., “Dedication to Dr. Michele Dionne (1954 - 2012)”, Estuaries and Coasts, vol. 38. Springer, pp. 1213-1214, 2015.
V. E. Price, Dijkstra, J. A., O'Neil-Dunne, J. P. M., Parrish, C. E., Nagel, E., and Pe'eri, S., “Developing methodology for efficient eelgrass habitat mapping across lidar systems”, Marine Geological and Biological Habitat Mapping (GEOHAB). Salvador, Brazil, 2015.
A. L. Chase, Dijkstra, J. A., and Harris, L. G., “Does settlement plate material matter? The influence of substrate type on fouling community development”, Benthic Ecology Meetings. Quebec City, Quebec, Canada, 2015.
J. A. Dijkstra, Mello, K., Litterer, A. S., Wells, C., Harris, L. G., and Ware, C., “Introduced species increase complexity and biodiversity of rocky subtidal seascapes”, Benthic Ecology Meetings. Quebec City, Quebec, Canada, 2015.
A. Hiley, Dijkstra, J. A., Seavey, J., and Chen, C. Y., “Mercury Concentrations in Rocky Shore Island and Mainland Populations”, Regional Association for Research in the Gulf of Maine. Portsmouth, NH, 2015.
L. McKenna, Dijkstra, J. A., and Parrish, C. E., “Assessing hurricane Sandy impacts on benthic habitats in Barnegut Bay with new topographic-bathymetric LIDAR technology”, 2014 AGU Ocean Sciences Meeting. Honolulu, HI, 2014.
C. E. Parrish and Dijkstra, J. A., “Benthic Habitat Mapping in Barnegat Bay with Topographic-Bathymetric Lidar Waveform Features”, European LiDAR Mapping Forum. Amsterdam, North Holland, The Netherlands, 2014.
P. D. Colarusso, Carman, M. R., Nelson, E. P., Chintala, M. M., Grunden, D. W., Wong, M. C., McKenzie, C., Matheson, K., Davidson, J., Heinig, C., Fox, S., Neckles, H., Schott, S., Pickerell, C., and Dijkstra, J. A., “Casual observations, random musings and wild extrapolations based on some actual data on the impact of invasive tunicates to eelgrass”, New England Estuarine Research Society. Salem, MA, 2014.
K. Mello, Litterer, A. S., Wells, C. D., and Dijkstra, J. A., “Complexity matters: The effect of non-native algal species on habitat architecture, biodiversity and predator-prey interactions”, The Regional Association for Research on the Gulf of Maine. Boston, MA, USA, 2014.
M. R. Carman, Colarusso, P. D., Grunden, D. W., Wong, M. C., McKenzie, C., Matheson, K., Davidson, J., Heinig, C., Fox, S., Neckles, H., Schott, S., Pickerell, C., and Dijkstra, J. A., “Distribution and diversity of invasive tunicates on eelgrass in eastern North America: A latitudinal study between N 40° and N 50°, New Jersey to Newfoundland”, EPA, Eelgrass Conference. Boston, MA, USA, 2014.
C. E. Parrish, Rogers, J., Ward, L. G., and Dijkstra, J. A., “Enhanced coastal mapping using lidar waveform features”, 15th Annual JALBTCX Airborne Coastal Mapping and Charting Workshop. Mobile, AL, 2014.
J. A. Dijkstra and Litvaitis, M., “Evolutionary response of colonial invertebrates to temperature in the Gulf of Maine”, International Invasive Sea-Squirt Conference. Woods Hole, MA, 2014.
A. L. Chase, Dijkstra, J. A., and Harris, L. G., “The influence of substrate identity on ascidian larval settlement preference and fouling community development”, International Invasive Sea-Squirt Conference. Woods Hole, MA, 2014.
J. A. Dijkstra and Simkanin, C., “Phenotypic and reproductive trade-offs of colonial invertebrates to salinity”, International Invasive Sea-Squirt Conference. Woods Hole, MA, 2014.
C. D. Wells, Pappal, A. L., Cao, Y., Carlton, J. T., Currimjee, Z., Dijkstra, J. A., Edquist, S. K., and Gittenberger, A., “Report on the 2013 Rapid Assessment Survey (RAS) of Marine Species at New England Bays and Harbors”, Massachussetts Office of Coastal Management (CZM) , Boston, MA, United States, 2014.
S. Pe'eri, Tibor, G., Madore, B., Illin, V., Ben-Avraham, Z., Rilov, G., Ketter, T., and Dijkstra, J. A., “Seafloor characterization and monitoring of the inner shelf in northern Israel using remote sensing”, Ocean Optics XXII. Portland, ME, 2014.
J. A. Dijkstra and Brown, C., “Effect of morphological transformation on habitat structure and associated species”, Benthic Ecology Meeting. Savnnah, GA, 2013.
J. A. Dijkstra, Buckman, K. L., Ward, D., Evans, D. W., Dionne, M., and Chen, C. Y., “Experimental and natural warming elevates mercury concentrations in estuarine fish”, PLoS ONE, vol. 8. p. e58401, 2013.PDF icon Dijkstra et al. 2013.pdf (469.51 KB)
J. A. Dijkstra, “Facilitation of native and non-native species by intermediate foundation species”, Coastal and Estuarine Research Federation. 2013.
J. A. Dijkstra, Lambert, W. J., and Harris, L. G., “Introduced species provide a novel temporal resource that facilitates native predator population growth”, Biological Invasions, vol. 15. pp. 911-919, 2013.PDF icon Dijkstra et al. 2013_apparentcompetition.pdf (467.2 KB)
C. M. McIntyre, Pappal, A. L., Bryant, J., Carlton, J. T., Cute, K., Dijkstra, J. A., Erickson, R., Garner, Y., Gittenberger, A., Grady, S. P., Haram, L., Harris, L. G., Hobbs, N. V., Lambert, C. C., Lambert, G., Lambert, W. J., Marques, A. C., Mathieson, A. C., McCuller, M., Mickiewicz, M., Pederson, J., Rock-Blake, R., Smith, J. P., Sorte, C., Stefaniak, L., and Wagstaff, M., “Report on the 2010 rapid assessment survey of marine species at New England floating docks and rocky shores.”, Office of Coastal Zone Management, Boston, Massachusetts, 2013.