Publications

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Habitat
J. Miksis-Olds, Miller, J. H., and Tyack, P. L., “The Acoustics Environment of the Florida Manatee: Correlation of Noise and Level of Habitat Use”, Journal of the Acoustical Society of America, 2004.
Habitat architecture
C. Ware, Dijkstra, J. A., Mello, K., Stevens, A. H., O'Brien, B., and Ikedo, W., “A Novel Three Dimensional Analysis of Functional Architecture that Describe the Properties of Macroalgae as Refuge”, Marine Ecology Progress Series, vol. 608. pp. 93-103, 2019.
habitat characterization
P. J. Etnoyer, Malik, M. A., Sowers, D., Ruby, C., Bassett, R., Dijkstra, J. A., Pawlenko, N., Gottfried, S., Mello, K., Finkbeiner, M., and Sallis, A., “Working with Video to Improve Deep-Sea Habitat Characterization”, Oceanography, vol. 31, No.1, Supplement. The Oceanographic Society, pp. 64-67, 2018.PDF icon WorkingWithVideo_Oceanography31-1-2018_supplement.pdf (1.75 MB)
habitat classification
E. J. Shumchenia, Guarinello, M. L., Carey, D. A., Lipsky, A., Greene, J. K., Mayer, L. A., Nixon, M. E., and Weber, J., “Inventory and Comparative evaluation of Seabed Mapping, Classification and Modeling Activities in the Northwest Atlantic, USA to Support Regional Ocean Planning”, Journal of Sea Research, vol. 100. Elsevier, pp. 133-149, 2015.
Y. Rzhanov, Pe'eri, S., and Shashkov, A., “Probabilistic Reconstruction of Color for Species' Classification Underwater”, IEEE/MTS Oceans '15. Genova, Italy, 2015.PDF icon PID3655693.pdf (392.19 KB)
habitat complexity
J. A. Dijkstra, Harris, L. G., Mello, K., Litterer, A. S., Wells, C., and Ware, C., “Invasive Species Transform Habitat Structure and Increase Biodiversity of Associated Species”, Journal of Ecology, vol. 105. Wiley, pp. 1668-1678, 2017.PDF icon Dijkstra et al_JEC_2017.pdf (871.82 KB)
habitat mapping
J. Kinney, Wolfskehl, S., Bruce, S., Bogonko, M., Bongiovanni, C., Armstrong, A. A., Nagel, E., Pe'eri, S., and Parrish, C. E., “Update on NOAA's IOCM Sandy Project for Charting and Habitat Mapping Using Topobathymetric Lidar Surveys”, 16th Annual JALBTCX Airborne Coastal Mapping and Charting Workshop. Corvallis, OR, 2015.
J. Kinney, Bogonko, M., White, M., Nagel, E., Dijkstra, J. A., Parrish, C. E., Wilson, N., and Armstrong, A. A., “Intensity and Reflectance Mapping for Habitat Mapping and Seafloor Characterization Using the Superstorm Sandy Lidar Data”, JALBTCX. Silver Spring, MD, 2016.
B. Costa, Walker, B., and Dijkstra, J. A., “Mapping and Quantifying Seascape Patterns”, in Seascape Ecology, S. J. Pittman, Ed. West Chester, England: John Wiley and Sons Ltd., 2017, pp. 27-49.PDF icon Chapter 2_Mapping_Quantifying_Seascapes2017-1.pdf (457.14 KB)
A. R. Norton and Dijkstra, S. J., “Comparing Acoustic- and Aerial Imagery-based Methods of Eelgrass Mapping at Two New England Sites”, Coastal and Estuarine Research Federation Biennial Conference. p. Providence, RI, 2017.PDF icon Norton_Abstract_CERF2017_final.pdf (140.67 KB)
N. Wilson, Parrish, C. E., Battista, T., C. Wright, W., Costa, B., Slocum, R., Dijkstra, J. A., and Tyler, M. T., “Mapping Seafloor Reflectance and Assessing Coral Reef Morphology with EAARL-B Topographic Lidar Waveforms”, Estuaries and Coasts. Springer, 2019.
Habitat structure
B. O'Brien, Mello, K., Litterer, A., and Dijkstra, J. A., “Seaweed Structure Shapes Trophic Interactions: A Case Study Using a Mid-Trophic Level Fish Species”, Journal of Experimental Marine Biology and Ecology, vol. 506. Elsevier, pp. 1-8, 2018.PDF icon O'Brienetal_JEMBE.pdf (868.99 KB)
habitat suitability model
R. Gasborro, Sowers, D., Margolin, A., and Cordes, E., “Distribution and Predicted Climatic Refugia for a Reef-Building Cold-Water Coral on the Southeast US Margin”, Global Change Biology, vol. 28(23). John Wiley and Sons Ltd. , Online, pp. 7108-7125, 2022.PDF icon Global_Change_Biology_Final_Published_Gasborr_et_al.pdf (9.14 MB)
habitats
B. O'Brien, Mello, K., Litterer, A., and Dijkstra, J. A., “Fish and the Decline of Kelp in the Gulf of Maine”, Benthic Ecology Meeting. p. Corpus Cristi, TX, 2018.
haiti
L. P. Snyder, Nyberg, J., Smith, S. M., Pe'eri, S., Madore, B., Rogers, J., Lowell, J., and DeAngelis, R., “Chart Adequacy Evaluation of the Coastal Water of Haiti Using Satellite-Derived Bathymetry”, National Oceanic and Atmospheric Administration (NOAA), National Ocean Survey (NOS), Silver Spring, MD, 2016.PDF icon TM_NOS_CS35_FY16_Snyder_ChartAdequacyEval.pdf (19.13 MB)
hampton harbor inlet
L. McKenna, “Patterns of Bedform Migration and Mean Tidal Currents in Hampton Harbor Inlet, New Hampshire, USA”, University of New Hampshire, Durham, NH, 2013.PDF icon McKENNA_THESIS.pdf (19.89 MB)
haptics
R. Komerska, Ware, C., Plumlee, M. D., and Arsenault, R., “Haptic-GeoZui3D: Exploring the Use of Haptics in AUV Path Planning”, Unmanned Untethered Submersible Technology Symposium (UUST). Autonomous Undersea Systems Institute , Durham, NH, 2003.Image icon Komerska_2003_UUST_Haptic-GeoZui3D-AUV_path_planning.jpg (722.73 KB)
hatteras outer ridge
J. V. Gardner, Armstrong, A. A., and Calder, B. R., “Hatteras Transverse Canyon, Hatteras Outer Ridge and Environs of the U.S. Atlantic Margin: A View from Multibeam Bathymetry and Backscatter”, Marine Geology, vol. 371. Elsevier, pp. 18-32, 2015.PDF icon Gardner-et-al -2015-Hatteras-Transverse-Canyon.pdf (7.35 MB)
Hatteras Transverse Canyon
J. V. Gardner, Armstrong, A. A., and Calder, B. R., “Hatteras Transverse Canyon, Hatteras Outer Ridge and Environs of the U.S. Atlantic Margin: A View from Multibeam Bathymetry and Backscatter”, Marine Geology, vol. 371. Elsevier, pp. 18-32, 2015.PDF icon Gardner-et-al -2015-Hatteras-Transverse-Canyon.pdf (7.35 MB)
HCI
T. Butkiewicz, Stevens, A. H., and Ware, C., “Multi-touch 3D Positioning with the Pantograph Technique”, ACM SIGGRAPH Symposium on Interactive 3D Graphics and Games, vol. 13. ACM, Montreal, Quebec, Canada, 2019.PDF icon Butkiewicz-Pantograph-i3D-2019.pdf (688.01 KB)
Healy
L. A. Mayer, “U.S. Law of the Sea Cruise to Map the Foot of the Slope and 2500-m Isobath of the U.S. Arctic Ocean Margin, Barrow to Barrow. Cruise Report”, University of New Hampshire (UNH), Center for Coastal and Ocean Mapping (CCOM)/Joint Hydrographic Center (JHC), 2003.PDF icon Mayer_03_cruise_report_HE-0302.pdf (1.5 MB)
L. A. Mayer and Armstrong, A. A., “U.S. Law of the Sea Cruise to Map and Sample the US Arctic Ocean Margin”, University of New Hampshire (UNH), Center for Coastal and Ocean Mapping (CCOM)/Joint Hydrographic Center (JHC), 2012.PDF icon HEALY1202_FINAL_CRUISE REPORT.pdf (9.31 MB)
L. A. Mayer, Calder, B. R., and Mosher, D. C., “U.S. Law of the Sea Cruise to Map and Sample the US Arctic Ocean Margin, Healy 1603”, Center for Coastal and Ocean Mapping / Joint Hydrographic Center, University of New Hampshire, Durham, NH, 2016.
hierarchical model
G. Masetti and Calder, B. R., “A Bayesian marine debris detector using existing hydrographic data products”, IEEE Oceans. IEEE, Genoa, Italy, 2015.PDF icon Masetti_Calder_Oceans15_Abstract.pdf (294.89 KB)
G. Masetti, Calder, B. R., and Wilson, M. J., “A Marine Object Manager for Detected and Database-stored Features”, Shallow Survey 2015. Plymouth, UK, 2015.PDF icon Masetti_Marine_Object_Manager_ShallowSurvey15_abstract.pdf (249.36 KB)
high-frequency
E. J. Bajor, “High-Frequency Broadband Seafloor Backscatter in a Sandy Estuarine Environment”, University of New Hampshire, Durham, NH, 2015.PDF icon Bajor-Thesis-Sept-2015.pdf (5.21 MB)
High-resolution mapping
F. F. Freire, Gyllencreutz, R., Greenwood, S., Mayer, L. A., Egilsson, A., Thorsteinsson, T., and Jakobsson, M., “High Resolution Mapping of Offshore and Onshore Glaciogenic Features in Metamorphic Bedrock Terrain, Melville Bay, Northwestern Greenland”, Geomorphology, vol. 250. Elsevier, pp. 29-40, 2015.
historic area remediation
L. Soares Rosa, “Seafloor Characterization of the Historic Area Remediation Site Using Angular Range Analysis”, University of New Hampshire, Durham, NH, 2007.PDF icon soares-rosa-luis-thesis.pdf (5.02 MB)
huddl
B. R. Calder and Masetti, G., “Huddler: a multi-language compiler for automatically generated format-specific data drivers”, U.S. Hydrographic Conference (US HYDRO) 2015. Gaylord Hotel, National Harbor, Maryland, USA, 2015.PDF icon Calder_Masetti_Huddler_a_multi-language_compiler_for_automatically_generated_format-specific_data_drivers.pdf (197.28 KB)
G. Masetti and Calder, B. R., “Huddl: the Hydrographic Universal Data Description Language”, International Hydrographic Review, vol. 13. International Hydrographic Bureau, Monaco, Monaco Cedex, Monaco, pp. 17-32, 2015.PDF icon Huddl_IHR_May2015.pdf (1.81 MB)
huddler
B. R. Calder and Masetti, G., “Huddler: a multi-language compiler for automatically generated format-specific data drivers”, U.S. Hydrographic Conference (US HYDRO) 2015. Gaylord Hotel, National Harbor, Maryland, USA, 2015.PDF icon Calder_Masetti_Huddler_a_multi-language_compiler_for_automatically_generated_format-specific_data_drivers.pdf (197.28 KB)
G. Masetti and Calder, B. R., “Huddl: the Hydrographic Universal Data Description Language”, International Hydrographic Review, vol. 13. International Hydrographic Bureau, Monaco, Monaco Cedex, Monaco, pp. 17-32, 2015.PDF icon Huddl_IHR_May2015.pdf (1.81 MB)
Human-Made Model
J. Miksis-Olds, Tyack, P. L., and Buck, J. R., “Captive Dolphins, Tursiops truncatus, Develop Signature Whistles That Match Acoustic Features of Human-Made Model Sounds”, Journal of the Acoustical Society of America, vol. 112 (2). Acoustical Society of America, San Francisco, CA, pp. 728-739, 2002.
hydroacoustic plumes
A. E. A. Blomberg, Weber, T. C., and Austeng, A., “Improved Visualization of Hydroacoustic Plumes Using the Split-Beam Aperture Coherence”, Sensors, vol. 18(7). 2018.
Hydroacoustics
H. Balir, Miksis-Olds, J., and Warren, J., “Spatial Variability of Epi- and Mesopelagic 38 kHz Backscatter from Fish and Zooplankton Across the Southeastern US Shelf Break”, Marine Ecology Progress Series, vol. 669. 2021.
hydrocarbon
S. Loranger and Weber, T. C., “An Evaluation of the Frequency Response of Hydrocarbon Droplets”, 171st Meeting of the Acoustical Society of America. p. Salt Lake City, UT, 2016.
hydroffice
G. Masetti, “HydrOffice: Past, Present, and Future”, NOAA OCS Field Procedures Workshop. p. Portland, OR, 2018.
G. Masetti, Wilson, M. J., Calder, B. R., Gallagher, B., and Zhang, C., “Research-driven Tools for Ocean Mappers”, Hydro International, vol. 22, 1. GeoMares Publishing, pp. 29-33, 2018.PDF icon hydro-international-2018-1-2-research-driven-tools-for-ocean-mappers.pdf (1.05 MB)
D. Manda and Masetti, G., “Pydro & HydrOffice: Open Tools for Ocean Mappers”, U.S. Hydro 2019. p. Biloxi, MS, 2019.
G. Masetti, Faulkes, T., and Kastrisios, C., “Hydrographic Survey Validation and Chart Adequacy Assessment Using Automated Solutions”, U.S. Hydro 2019. Biloxi, MS, USA, 2019.PDF icon USHydro2019_Masetti_et_al_Hydrographic_Survey_Validation_and_Chart_Adequacy_Assessment.pdf (882.67 KB)
G. Masetti and Faulkes, T., “Pydro and HydrOffice”, Effective Seabed Mapping Workflow. Canberra, ACT, Australia, 2019.
G. Masetti, Faulkes, T., and Calder, B. R., “Opening the Black Boxes in Ocean Mapping: Design and Implementation of the HydrOffice Framework”, AMSA 2019. p. Freemantle, WA, Australia, 2019.
J. M. Cordero Ros and Kastrisios, C., “Characterizing Free and Open-Source Tools for Ocean-Mapping”, 6th Hydrographic Engineering Conference. Lisbon, Portugal, pp. 53-56, 2020.PDF icon Cordero_Kastrisios_2020_FOSS4G_Procceedings.pdf (2.06 MB)
Hydrographic Data Processing
B. Lamey, Riley, J., Froelich, G., Miller, J., and Calder, B. R., “Variable Resolution Bathymetric-Gridding Technology for Nautical Charting: Case Study CHRT Data”, U.S. Hydrographic Conference (US HYDRO). The Hydrographic Society of America, New Orleans, LA, USA, 2013.
hydrographic survey
B. R. Calder and Elmore, P. A., “Development of an Uncertainty Propagation Equation for Scalar Fields”, Marine Geodesy, vol. 40, 5. Taylor & Francis Group, pp. 341-360, 2017.PDF icon calder-marine-geodesy-2017.pdf (2.27 MB)
G. Masetti, Faulkes, T., Wilson, M. J., and Wallace, J., “Effective Automated Procedures for Hydrographic Data Review”, Geomatics, vol. 2(3). MDPI, Basel, Switzerland, pp. 338-354, 2022.
hydrographic survey validation
G. Masetti, Faulkes, T., and Kastrisios, C., “Hydrographic Survey Validation and Chart Adequacy Assessment Using Automated Solutions”, U.S. Hydro 2019. Biloxi, MS, USA, 2019.PDF icon USHydro2019_Masetti_et_al_Hydrographic_Survey_Validation_and_Chart_Adequacy_Assessment.pdf (882.67 KB)
HYDROGRAPHIC SURVEY;SEAFLOOR SAMPLES;ACOUSTIC CONCEPTS;SEDIMENT GRAIN
J. A. Alvarado, “Acoustic Backscatter Processing for the Navy of Ecuador”. 2012.
Hydrographic surveys
C. Kastrisios and Pilikou, M., “Nautical Cartography Competences and Their Effect to the Realisation of a Worldwide Electronic Navigational Charts Database, the Performance of ECDIS and the Fulfilment of IMO Chart Carriage Requirement”, Marine Policy, vol. 75. Elsevier, pp. 29-40, 2017.
Hydrographic Uncertainty
B. R. Calder, “Use (and Potential Abuse) of Uncertainty in Hydrography”, 6th International Conference on High-Resolution Survey in Shallow Water. Wellington, New Zealand, 2012.
hydrographic uncertainty model
G. Masetti, Augustin, J. - M., Lurton, X., and Calder, B. R., “Applications of Sonar Detection Uncertainty for Survey Quality Control and Data Processing”, Shallow Survey 2018. p. St. John's, NL, Canada, 2018.PDF icon Masetti_SS2018_Sonar_Detection_Uncertainty_abstract.pdf (409.17 KB)
hydrographic workflow
C. Kastrisios and Calder, B. R., “Industry Discovery for Ocean Mapping Workflow Associated Challenges”, 2021 US Hydro Conference. p. Online, 2021.
hydrography
G. Imahori, Ferguson, J., Wozumi, T., Scharff, D., Pe'eri, S., Parrish, C. E., White, S. A., Jeong, I., Sellars, J., and Aslaksen, M., “A procedure for developing an acceptance test for airborne bathymetric lidar data application to NOAA charts in shallow waters”, National Oceanic and Atmospheric Administration (NOAA), National Ocean Survey (NOS), Silver Spring, MD, 2013.
B. R. Calder, “On Risk-Based Expression of Hydrographic Uncertainty”, Marine Geodesy, vol. 38(2). Taylor & Francis, pp. 99-127, 2015.
D. Manda, Thein, M. - W., and Armstrong, A. A., “Depth Adaptive Hydrographic Survey Behavior for Autonomous Surface Vessels”, IEEE/MTS Oceans '15. IEEE, National Harbor, MD, 2015.PDF icon IEEEOceans_2015_Abstract_Manda.pdf (386.24 KB)
D. Manda, Thein, M. - W., D'Amore, A., and Armstrong, A. A., “A Low Cost System for Autonomous Surface Vehicle based Hydrographic Survey”, U.S. Hydrographic Conference 2015. 2015.PDF icon USHydro_2015_Manda_Final.pdf (1.26 MB)
B. R. Calder, “Resolution Determination through Level of Aggregation Analysis”, U.S. Hydrographic Conference (US HYDRO). The Hydrographic Society of America, Biloxi, MS, 2019.PDF icon Calder_USHydro19_LevelOfAggregationAnalysis.pdf (815.13 KB)
S. Hoy and Calder, B. R., “The Viability of Crowdsourced Bathymetry for Authoritative Use”, U.S. Hydrographic Conference (US HYDRO). The Hydrographic Society of America, Biloxi, MS, 2019.
J. M. Cordero Ros and Kastrisios, C., “Characterizing Free and Open-Source Tools for Ocean-Mapping”, 6th Hydrographic Engineering Conference. Lisbon, Portugal, pp. 53-56, 2020.PDF icon Cordero_Kastrisios_2020_FOSS4G_Procceedings.pdf (2.06 MB)
J. M. Cordero Ros and Kastrisios, C., “EMODNET Bathymetry Services and Free and Open-Source Software in Support of Hydrographic Survey Procedures”, EMODnet Open Conference. p. Online, 2021.
J. M. Cordero Ros and Kastrisios, C., “Using Free and Open-Source Software in Ocean Mapping: Case Study of the Spanish EEZ project near the Canary Islands”, 2021 US Hydro Conference. p. Online, 2021.
N. Dyer, Kastrisios, C., and De Floriani, L., “Sounding Labels and Scale for Bathymetric Data Generalization in Nautical Cartography”, 2021 US Hydro Conference. p. Online, 2021.
N. Dyer, Kastrisios, C., and De Floriani, L., “Label-Based Generalization of Bathymetry Data for Hydrographic Sounding Selection”, Cartography and Geographic Information Science. Taylor & Francis, 2022.
C. Kastrisios, Sullivan, B. M., Powell, J., and Baek, Y., “Hydrographic Geospatial Data Standards”, in The Geographic Information Science & Technology Body of Knowledge, 2nd Quarter 2022 nd ed., 2022.
N. Dyer, Kastrisios, C., and De Floriani, L., “Chart Features, Data Quality, and Scale in Cartographic Sounding Selection from Composite Bathymetric Data”, Geo-spatial Information Science. Submitted.
Hydrospatial
J. M. Cordero Ros and Kastrisios, C., “EMODNET Bathymetry Services and Free and Open-Source Software in Support of Hydrographic Survey Procedures”, EMODnet Open Conference. p. Online, 2021.
J. M. Cordero Ros and Kastrisios, C., “Using Free and Open-Source Software in Ocean Mapping: Case Study of the Spanish EEZ project near the Canary Islands”, 2021 US Hydro Conference. p. Online, 2021.
S. Contarinis and Kastrisios, C., “Marine Spatial Data Infrastructure”, in The Geographic Information Science & Technology Body of Knowledge, 2022.
Hydrothermal
G. C. Wheat, Hartwell, A. M., McManus, J., Fisher, A. T., Orcutt, B., Schlicht, L., and Niedenzu, S., “Geology and Fluid Discharge at Dorado Outcrop, a Low Temperature Ridge-Flank Hydrothermal System”, Geochemistry, Geophysics, Geosystems, vol. 20(1). AGUPubs, pp. 487-504, 2019.
A. M. Hartwell, Voight, J. R., and Wheat, C. G., “Clusters of Deep-Sea Egg-Brooding Octopods Associated with Warm Fluid Discharge: An Ill-Fated Fragment of a Larger, Discrete Population?”, Deep Sea Research Part I Oceanographic Research Papers, vol. 135. ELSEVIER, pp. 1-8, 2018.PDF icon Hartwell et al 2018.pdf (4.44 MB)
hydrothermal activity
N. A. Raineault, Smart, C., Mayer, L. A., Ballard, R., Fisher, C. R., Marsh, L., and Shank, T. M., “Signs of Recent Volcanism and Hydrothermal Activity Along the Eastern Segment of the Galapagos Spreading Center”, 2016 Fall Meeting, American Geophysical Union (AGU). American Geophysical Union , San Francisco, CA, p. San Francisco, CA, 2016.
Hydrothermal ciruclation
C. G. Wheat, Becker, K., Villinger, H., Orcutt, B. N., Fournier, T., Hartwell, A. M., and Paul, C., “Subseafloor Cross‐Hole Tracer Experiment Reveals Hydrologic Properties, Heterogeneities, and Reactions in Slow‐Spreading Oceanic Crust”, Geochemistry, Geophysics, Geosystems, vol. 21(1). AGUpubs, pp. 1-15, 2020.
hydrothermal vents
N. A. Raineault, Ballard, R., Mayer, L. A., Fisher, C. R., Carey, S., Marsh, L., Kane, R., Tüzün, S., Shank, T. M., and Smart, C., “Exploration of Hydrothermal Vents Along the Galapagos Spreading Center”, Oceanography, vol. 29, No.1, Supplement. The Oceanography Society, pp. 35-7, 2016.PDF icon mayer-oceanography-v29-no1-galapagos.pdf (692.56 KB)
hypothesis testing
H. Kates Varghese, Lowell, K., and Miksis-Olds, J., “Global-Local-Comparison Method: Understanding Marine Mammal Spatial Behavior by Applying Spatial Statistics and Hypothesis Testing to Passive Acoustic Data”, Frontiers in Marine Science, vol. 8:625322. 2021.
hypoxia
E. Weidner, Stranne, C., Sundberg, J. Henati, Weber, T. C., Mayer, L. A., and Jakobsson, M., “Tracking the Spatiotemporal Variability of the Oxic–Anoxic Interface in the Baltic Sea with Broadband Acoustics”, ICES Journal of Marine Science. 2020.